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Intron Name: Anas_platyrhynchos_platyrhynchos_18_9838912_9839301_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9838912 - 9839301

Intron Length:

390

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTTGTCAA

5'SS Class:

major

3'SS Sequence:

ACTTTGTTTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CACTAAT

U12 Branch Point Sequence:

TAATACTTACTT

Flanking Amino Acid:

KSHMQSIIDKLQSPESFAKS

Intron Amino Acid Position:

321

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.7

0.58

1.2

38.6

Major BPS

74.4

0.61

0.9

73.6

28.6

Major PPT

83.7

0.76

0.8

80.8

36.2

Minor 5ss

-1.6

2.6

41.5

44.9

Minor BPS

58.4

0.34

1.8

75.21

41.3

Associated Gene:

Gene:

RC3H2

Ensembl Gene ID:

ENSAPLG00000013920

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036581

9826429 - 9844074

17646

ENSAPLT00000022596

9826296 - 9844074

17779

ENSAPLT00000014540

9826296 - 9844074

17779