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Intron Name: Anas_platyrhynchos_platyrhynchos_18_9840622_9841561_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9840622 - 9841561

Intron Length:

940

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGTAA

5'SS Class:

strong_major

3'SS Sequence:

TTCTGCGTTAAAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCTTAT

U12 Branch Point Sequence:

TCTGCGTTAAAG

Flanking Amino Acid:

RARGCQFLGPAMQEEALKLV

Intron Amino Acid Position:

195

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.8

0.96

0.8

28.7

Major BPS

82.6

0.81

0.8

71.7

Major PPT

67.3

0.39

1.1

66.6

38.7

Minor 5ss

-1.6

3.3

46.2

49.1

Minor BPS

-0.2

2.3

60.06

47.5

Associated Gene:

Gene:

RC3H2

Ensembl Gene ID:

ENSAPLG00000013920

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022596

9826296 - 9844074

17779

ENSAPLT00000014540

9826296 - 9844074

17779

ENSAPLT00000036581

9826429 - 9844074

17646