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Intron Name: Anas_platyrhynchos_platyrhynchos_18_9841796_9842248_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9841796 - 9842248

Intron Length:

453

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGTTTC

5'SS Class:

strong_major

3'SS Sequence:

TCCTTCCTCGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGATAAA

U12 Branch Point Sequence:

AGTAGTTTACCT

Flanking Amino Acid:

LYLKPLSGGKGVASLNQSAL

Intron Amino Acid Position:

117

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.4

1.02

0.7

87.4

21.4

Major BPS

63.5

0.33

1.2

64.3

39.6

Major PPT

77.1

0.61

0.7

72.9

25.3

Minor 5ss

39.3

-1.2

2.9

45.2

Minor BPS

47.9

-0

67.53

43.3

Associated Gene:

Gene:

RC3H2

Ensembl Gene ID:

ENSAPLG00000013920

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014540

9826296 - 9844074

17779

ENSAPLT00000036581

9826429 - 9844074

17646

ENSAPLT00000022596

9826296 - 9844074

17779