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Intron Name: Anas_platyrhynchos_platyrhynchos_18_9876673_9877191_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9876673 - 9877191

Intron Length:

519

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTTAGAAAA

5'SS Class:

strong_major

3'SS Sequence:

TGTCTTACCCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTTAT

U12 Branch Point Sequence:

TATGTTTCAACT

Flanking Amino Acid:

MSLPVKPSQGDCEDLSPFTP

Intron Amino Acid Position:

129

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.6

0.72

1.1

78.1

31.1

Major BPS

91.4

1.03

0.7

79.9

34.9

Major PPT

70.7

0.47

0.9

63.2

38.2

Minor 5ss

29.1

-2.4

2.6

31.9

42.1

Minor BPS

59.8

0.39

1.6

76.67

40.2

Associated Gene:

Gene:

RABGAP1

Ensembl Gene ID:

ENSAPLG00000006937

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007282

9869417 - 9928999

59583