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Intron Name: Anas_platyrhynchos_platyrhynchos_18_9886314_9887219_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9886314 - 9887219

Intron Length:

906

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGATGT

5'SS Class:

strong_major

3'SS Sequence:

ATTCTGCTGGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTCTCAT

U12 Branch Point Sequence:

ATCTCCTTTATT

Flanking Amino Acid:

PSPPEDDEEEDNDEPLLSGS

Intron Amino Acid Position:

517

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.9

0.75

72.5

39.9

Major BPS

77.2

0.67

1.2

79.6

35.6

Major PPT

70.6

0.46

40.2

Minor 5ss

39.2

-1.2

3.1

48.2

47.4

Minor BPS

0.71

1.6

82.14

39.4

Associated Gene:

Gene:

RABGAP1

Ensembl Gene ID:

ENSAPLG00000006937

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007282

9869417 - 9928999

59583