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Intron Name: Anas_platyrhynchos_platyrhynchos_18_9887314_9890120_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9887314 - 9890120

Intron Length:

2807

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGTTGC

5'SS Class:

strong_major

3'SS Sequence:

CCCCCATGCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTGTAC

U12 Branch Point Sequence:

ATACCAGTAACA

Flanking Amino Acid:

LETWGELLSKWHLNLSVRPK

Intron Amino Acid Position:

548

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.2

0.88

0.9

74.9

36.2

Major BPS

61.6

0.29

1.4

63.4

Major PPT

61.6

0.26

0.9

52.8

35.6

Minor 5ss

40.7

-1

2.8

49.7

41.9

Minor BPS

48.5

-0.1

2.2

65.86

39.7

Associated Gene:

Gene:

RABGAP1

Ensembl Gene ID:

ENSAPLG00000006937

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007282

9869417 - 9928999

59583