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Intron Name: Anas_platyrhynchos_platyrhynchos_18_9917044_9917403_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9917044 - 9917403

Intron Length:

360

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTGAGTATC

5'SS Class:

strong_major

3'SS Sequence:

TCCTTGTCTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTGCAA

U12 Branch Point Sequence:

TTTGCAATTACT

Flanking Amino Acid:

IFNVALGLLKTTKDDLLLTD

Intron Amino Acid Position:

766

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.8

0.9

84.1

26.4

Major BPS

65.8

0.39

1.4

77.7

37.1

Major PPT

80.9

0.7

0.8

72.6

37.7

Minor 5ss

36.6

-1.5

2.9

46.1

36.1

Minor BPS

48.5

-0

2.3

78.69

42.9

Associated Gene:

Gene:

RABGAP1

Ensembl Gene ID:

ENSAPLG00000006937

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007282

9869417 - 9928999

59583