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Intron Name: Anas_platyrhynchos_platyrhynchos_18_9922692_9925712_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9922692 - 9925712

Intron Length:

3021

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTAAGACTT

5'SS Class:

strong_major

3'SS Sequence:

CTCTGTGTTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTGTAAA

U12 Branch Point Sequence:

ATCTCTTTAGTG

Flanking Amino Acid:

KIALRKDLDNAEEKADALNK

Intron Amino Acid Position:

877

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.3

0.71

77.5

37.2

Major BPS

62.9

0.32

1.2

65.3

38.6

Major PPT

0.65

0.9

75.9

Minor 5ss

40.3

-1.1

3.4

62.1

42.3

Minor BPS

58.4

0.13

1.6

61.15

41.7

Associated Gene:

Gene:

RABGAP1

Ensembl Gene ID:

ENSAPLG00000006937

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007282

9869417 - 9928999

59583