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Intron Name: Anas_platyrhynchos_platyrhynchos_18_9927211_9927751_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9927211 - 9927751

Intron Length:

541

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTAAGAGAC

5'SS Class:

strong_major

3'SS Sequence:

GTATTTACTTTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTTAC

U12 Branch Point Sequence:

AGGTATTTACTT

Flanking Amino Acid:

ANKAEIEKIRQKVDDCEHCR

Intron Amino Acid Position:

964

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.2

0.74

69.5

35.6

Major BPS

78.8

0.71

0.9

69.7

37.1

Major PPT

73.8

0.54

0.9

71.6

39.2

Minor 5ss

30.3

-2.3

3.3

33.4

Minor BPS

48.7

-0

1.8

63.6

41.2

Associated Gene:

Gene:

RABGAP1

Ensembl Gene ID:

ENSAPLG00000006937

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007282

9869417 - 9928999

59583