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Intron Name: Anas_platyrhynchos_platyrhynchos_18_9927950_9928742_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9927950 - 9928742

Intron Length:

793

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATACTT

5'SS Class:

strong_major

3'SS Sequence:

CTTCTGTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTAAA

U12 Branch Point Sequence:

AATTAAAGAAAT

Flanking Amino Acid:

QLVEAECKIQDLEHHLGLAL

Intron Amino Acid Position:

1030

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.75

77.4

37.4

Major BPS

73.8

0.59

0.9

26.8

Major PPT

85.4

0.8

79.9

32.1

Minor 5ss

-1.4

3.3

57.1

Minor BPS

41.4

-0.5

62.2

Associated Gene:

Gene:

RABGAP1

Ensembl Gene ID:

ENSAPLG00000006937

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007282

9869417 - 9928999

59583