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Intron Name: Anas_platyrhynchos_platyrhynchos_18_9954685_9957395_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9954685 - 9957395

Intron Length:

2711

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTATGTATA

5'SS Class:

strong_major

3'SS Sequence:

TTTCTCTCTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AACTTAT

U12 Branch Point Sequence:

CTTATTTGGAGT

Flanking Amino Acid:

YGYSTAAPAYGLPKRMVLLP

Intron Amino Acid Position:

647

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.6

0.75

80.1

34.5

Major BPS

74.8

0.62

0.9

63.7

35.1

Major PPT

85.5

0.8

0.6

81.7

23.2

Minor 5ss

45.9

-0.4

2.5

60.3

44.3

Minor BPS

45.7

-0.2

1.8

63.3

41.5

Associated Gene:

Gene:

STRBP

Ensembl Gene ID:

ENSAPLG00000006350

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029795

9954241 - 9985832

31592