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Intron Name: Anas_platyrhynchos_platyrhynchos_18_9954685_9959493_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9954685 - 9959493

Intron Length:

4809

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGCAT

5'SS Class:

strong_major

3'SS Sequence:

TTTCTCTCTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AACTTAT

U12 Branch Point Sequence:

CTTATTTGGAGT

Flanking Amino Acid:

AAAATGYITPGLPKRMVLLP

Intron Amino Acid Position:

632

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.8

0.94

0.9

78.6

37.2

Major BPS

74.8

0.62

0.9

63.7

35.1

Major PPT

85.5

0.8

0.6

81.7

23.2

Minor 5ss

32.4

-2

3.4

46.7

48.6

Minor BPS

45.7

-0.2

1.8

63.3

41.5

Associated Gene:

Gene:

STRBP

Ensembl Gene ID:

ENSAPLG00000006350

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028806

9954250 - 9985662

31413