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Intron Name: Anas_platyrhynchos_platyrhynchos_18_9959618_9961290_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9959618 - 9961290

Intron Length:

1673

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGAATT

5'SS Class:

strong_major

3'SS Sequence:

TTACTCTGAGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTTATTACTC

Flanking Amino Acid:

NNKKKKILPQTKGVVNTAVS

Intron Amino Acid Position:

590

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

1.06

0.7

93.7

19.9

Major BPS

96.5

1.15

0.6

34.2

Major PPT

69.6

0.44

66.6

39.1

Minor 5ss

39.4

-1.2

3.1

57.6

46.6

Minor BPS

0.26

1.8

74.76

36.2

Associated Gene:

Gene:

STRBP

Ensembl Gene ID:

ENSAPLG00000006350

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029795

9954241 - 9985832

31592

ENSAPLT00000028806

9954250 - 9985662

31413

ENSAPLT00000023866

9950995 - 9985832

34838

ENSAPLT00000006643

9943336 - 9985832

42497