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Intron Name: Anas_platyrhynchos_platyrhynchos_18_9963256_9965659_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9963256 - 9965659

Intron Length:

2404

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGGCAG

5'SS Class:

strong_major

3'SS Sequence:

GCTTTTGTTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTCAT

U12 Branch Point Sequence:

TTACAGTTCATT

Flanking Amino Acid:

KTAKLHVAVKVLQAMGYPTG

Intron Amino Acid Position:

445

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.3

0.88

0.9

69.6

42.7

Major BPS

91.2

1.02

0.7

91.7

20.2

Major PPT

77.7

0.62

0.9

72.9

37.4

Minor 5ss

30.1

-2.3

3.2

37.6

47.1

Minor BPS

43.4

-0.4

2.5

67.18

43.5

Associated Gene:

Gene:

STRBP

Ensembl Gene ID:

ENSAPLG00000006350

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006643

9943336 - 9985832

42497

ENSAPLT00000048187

9950995 - 9985832

34838

ENSAPLT00000029795

9954241 - 9985832

31592

ENSAPLT00000028806

9954250 - 9985662

31413

ENSAPLT00000023866

9950995 - 9985832

34838