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Intron Name: Anas_platyrhynchos_platyrhynchos_18_9965860_9966670_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9965860 - 9966670

Intron Length:

811

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGTGCA

5'SS Class:

strong_major

3'SS Sequence:

TATCTTGTACTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCACAC

U12 Branch Point Sequence:

CTATCTTGTACT

Flanking Amino Acid:

NKKMKRNLRKILDSKAIDLM

Intron Amino Acid Position:

378

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.3

0.83

0.9

77.9

Major BPS

55.2

0.13

1.1

62.9

34.3

Major PPT

69.1

0.43

63.1

42.6

Minor 5ss

34.7

-1.7

3.2

41.8

38.8

Minor BPS

54.5

0.22

1.8

73.33

43.6

Associated Gene:

Gene:

STRBP

Ensembl Gene ID:

ENSAPLG00000006350

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029795

9954241 - 9985832

31592

ENSAPLT00000028806

9954250 - 9985662

31413

ENSAPLT00000023866

9950995 - 9985832

34838

ENSAPLT00000006643

9943336 - 9985832

42497

ENSAPLT00000048187

9950995 - 9985832

34838