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Intron Name: Anas_platyrhynchos_platyrhynchos_19_10001506_10003236_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10001506 - 10003236

Intron Length:

1731

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGTTCT

5'SS Class:

strong_major

3'SS Sequence:

CCTGTTGCTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

CAATTTTTAATG

Flanking Amino Acid:

VGRLAPSDYFGEIALLMNRP

Intron Amino Acid Position:

326

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.4

0.93

0.8

83.2

29.3

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

70.1

0.45

0.9

61.6

40.1

Minor 5ss

-0.8

2.8

56.6

41.9

Minor BPS

60.1

0.18

1.3

56.34

39.8

Associated Gene:

Gene:

PRKAR1A

Ensembl Gene ID:

ENSAPLG00000008613

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009000

10001112 - 10014472

13361