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Intron Name: Anas_platyrhynchos_platyrhynchos_19_10053564_10059035_F

Intron Information:

Intron Rank:

127947

Intron Class:

major

Intron Phase:

Intron Coordinates:

10053564 - 10059035

Intron Length:

5472

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGAACA

5'SS Class:

strong_major

3'SS Sequence:

TCTTTGTCTCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCAAAT

U12 Branch Point Sequence:

TCTGCTTCAAAT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.3

0.76

74.4

Major BPS

77.3

0.68

81.5

Major PPT

0.79

0.8

37.3

Minor 5ss

32.4

-2

3.1

40.9

45.1

Minor BPS

0.24

1.8

73.05

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018941

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023206

10053406 - 10060018

6613