Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_19_10076158_10076541_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10076158 - 10076541

Intron Length:

384

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGAGGC

5'SS Class:

major

3'SS Sequence:

CGTGGTTGTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GAAACAT

U12 Branch Point Sequence:

GAAACATCGACG

Flanking Amino Acid:

AGETTPTAGQVLLRRREGAT

Intron Amino Acid Position:

1350

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.4

0.69

65.2

40.3

Major BPS

48.2

-0.1

1.2

55.4

40.4

Major PPT

67.5

0.39

1.1

60.2

44.9

Minor 5ss

29.4

-2.4

3.5

41.3

45.4

Minor BPS

43.1

-0.6

1.9

43.97

40.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006948

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007316

10073296 - 10092241

18946