Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_19_10097903_10098597_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10097903 - 10098597

Intron Length:

695

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGTGCT

5'SS Class:

strong_major

3'SS Sequence:

TTTCCCATTCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACCTCAT

U12 Branch Point Sequence:

CCAGCCTGACCT

Flanking Amino Acid:

RRLPAGEARKLCFALSILGN

Intron Amino Acid Position:

191

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.4

0.91

0.8

80.6

31.9

Major BPS

73.5

0.58

73.6

32.5

Major PPT

82.9

0.74

0.8

74.3

35.1

Minor 5ss

41.4

-1

3.1

45.7

Minor BPS

47.4

-0.1

1.9

61.09

48.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016523

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019616

10096242 - 10101858

5617