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Intron Name: Anas_platyrhynchos_platyrhynchos_19_10140152_10140315_R


Intron Information:

Intron Rank:
15

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
10140152 - 10140315

Intron Length:
164

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CTG|GTGAGCCCT

5'SS Class:
major

3'SS Sequence:
TTTTTGTTTCCAG|A

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TGCTCAA

U12 Branch Point Sequence:
TCTTGCTCAAAA

Flanking Amino Acid:
HFMDEADILADRKAVISQGM

Intron Amino Acid Position:
684

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
76.4
0.62
1
64.1
41.7

Major BPS
70.6
0.51
1.1
71.6
36.4

Major PPT
91.8
0.94
0.7
84.6
36

Minor 5ss
35.2
-1.7
3.1
45.9
43.3

Minor BPS
52.4
0.07
2.1
68.84
43.3

Associated Gene:

Gene:
ABCA5

Ensembl Gene ID:

Chromosome:
19

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

10125502 - 10152097
26596