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Intron Name: Anas_platyrhynchos_platyrhynchos_19_10141809_10142031_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10141809 - 10142031

Intron Length:

223

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGACTT

5'SS Class:

strong_major

3'SS Sequence:

GGGCTTTTTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAATTAA

U12 Branch Point Sequence:

ATTAAGTTGATT

Flanking Amino Acid:

ILCGLCPPTDGFVSVYGHRV

Intron Amino Acid Position:

539

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.1

0.71

0.9

73.3

37.3

Major BPS

58.9

0.22

50.1

34.6

Major PPT

76.3

0.59

72.8

42.2

Minor 5ss

32.6

-2

3.3

45.3

43.7

Minor BPS

47.4

-0.1

2.2

71.01

Associated Gene:

Gene:

ABCA5

Ensembl Gene ID:

ENSAPLG00000006114

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006428

10125502 - 10152097

26596