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Intron Name: Anas_platyrhynchos_platyrhynchos_19_10142143_10142670_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10142143 - 10142670

Intron Length:

528

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTAAGAACA

5'SS Class:

strong_major

3'SS Sequence:

CCTTGTTGGGTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCACCAA

U12 Branch Point Sequence:

TCCTGTCCACCT

Flanking Amino Acid:

KKGETVEALRNLSFDIYEGQ

Intron Amino Acid Position:

502

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.75

0.9

77.2

Major BPS

47.5

-0.1

1.3

40.2

Major PPT

0.29

1.1

60.9

40.2

Minor 5ss

35.5

-1.6

2.9

42.3

38.1

Minor BPS

38.4

-0.8

2.2

55.84

46.7

Associated Gene:

Gene:

ABCA5

Ensembl Gene ID:

ENSAPLG00000006114

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006428

10125502 - 10152097

26596