Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_19_10150502_10151325_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10150502 - 10151325

Intron Length:

824

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGCGGG

5'SS Class:

strong_major

3'SS Sequence:

CTTCTTGGTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

GAAGTTTTAATT

Flanking Amino Acid:

KCRTKKSSVQEILFPLFFLF

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

0.9

63.1

43.4

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

76.8

0.6

72.2

37.8

Minor 5ss

30.3

-2.3

3.3

37.8

47.1

Minor BPS

57.5

0.31

1.3

65.91

39.2

Associated Gene:

Gene:

ABCA5

Ensembl Gene ID:

ENSAPLG00000006114

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006428

10125502 - 10152097

26596