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Intron Name: Anas_platyrhynchos_platyrhynchos_19_10166466_10186782_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10166466 - 10186782

Intron Length:

20317

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGGCTC

5'SS Class:

strong_major

3'SS Sequence:

TCTCGTTTCGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTAAT

U12 Branch Point Sequence:

CTTTCTTTAATT

Flanking Amino Acid:

MSQARGKKRNPGLKI

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.5

0.93

0.9

76.9

38.6

Major BPS

87.2

0.92

0.9

87.6

25.6

Major PPT

80.8

0.69

0.8

75.8

32.6

Minor 5ss

35.3

-1.7

3.4

50.1

46.5

Minor BPS

83.7

1.13

91.31

32.6

Associated Gene:

Gene:

MAP2K6

Ensembl Gene ID:

ENSAPLG00000005826

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039312

10166185 - 10196997

30813

ENSAPLT00000006066

10166185 - 10203774

37590