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Intron Name: Anas_platyrhynchos_platyrhynchos_19_10193555_10195589_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10193555 - 10195589

Intron Length:

2035

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGAGCC

5'SS Class:

strong_major

3'SS Sequence:

TTCCTTCTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CATGCAT

U12 Branch Point Sequence:

ATGACAGTGACT

Flanking Amino Acid:

LHSKLSVIHRDVKPSNVLIN

Intron Amino Acid Position:

179

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.1

0.95

0.8

31.7

Major BPS

54.9

0.12

1.4

39.8

Major PPT

88.7

0.87

0.6

84.2

23.8

Minor 5ss

31.7

-2.1

3.3

42.5

44.5

Minor BPS

45.8

-0.2

2.3

67.37

43.2

Associated Gene:

Gene:

MAP2K6

Ensembl Gene ID:

ENSAPLG00000005826

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039312

10166185 - 10196997

30813

ENSAPLT00000006066

10166185 - 10203774

37590