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Intron Name: Anas_platyrhynchos_platyrhynchos_19_1046114_1052445_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1046114 - 1052445

Intron Length:

6332

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGGCG

5'SS Class:

strong_major

3'SS Sequence:

TTCTTTCCGGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAGAAAA

U12 Branch Point Sequence:

TAGACTAGAAAA

Flanking Amino Acid:

IRPDRMTYAVRDFVEEKLGS

Intron Amino Acid Position:

179

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.8

0.89

0.9

70.5

38.9

Major BPS

50.2

0.01

1.1

57.3

36.3

Major PPT

79.5

0.66

0.9

77.3

31.5

Minor 5ss

29.5

-2.3

3.4

38.5

46.7

Minor BPS

-0.4

1.7

52.88

38.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003696

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003783

987601 - 1094465

106865