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Intron Name: Anas_platyrhynchos_platyrhynchos_19_1052595_1055832_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1052595 - 1055832

Intron Length:

3238

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAATAAA

5'SS Class:

strong_major

3'SS Sequence:

TTGTTTTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTGT

U12 Branch Point Sequence:

TTTTTTTTGTTT

Flanking Amino Acid:

VDPLKDVEKQGKKLGYTFNN

Intron Amino Acid Position:

229

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.4

0.91

0.8

85.6

24.6

Major BPS

38.1

-0.7

4.3

71.7

44.6

Major PPT

92.9

0.97

0.7

92.3

26.6

Minor 5ss

34.4

-1.8

2.8

41.8

44.8

Minor BPS

46.8

-0.1

3.4

81.5

34.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003696

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003783

987601 - 1094465

106865