Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_19_10726605_10735846_F

Intron Information:

Intron Rank:

149772

Intron Class:

major

Intron Phase:

Intron Coordinates:

10726605 - 10735846

Intron Length:

9242

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTCAGTGTT

5'SS Class:

strong_major

3'SS Sequence:

CTTCTAATTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

TGCCTTCTAATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.5

0.79

1.2

85.2

32.2

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

77.2

0.61

0.8

74.8

33.6

Minor 5ss

-1.8

3.3

49.7

46.6

Minor BPS

49.5

0.04

1.6

66.06

39.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030586

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040866

10703449 - 10756945

53497

ENSAPLT00000039913

10703449 - 10761756

58308