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Intron Name: Anas_platyrhynchos_platyrhynchos_19_11083179_11083705_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11083179 - 11083705

Intron Length:

527

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTAGGTACC

5'SS Class:

major

3'SS Sequence:

CCTCCCTCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCGACAC

U12 Branch Point Sequence:

GTCCCCTCCCCT

Flanking Amino Acid:

SEVHSPGEHSGQSQGPPTPP

Intron Amino Acid Position:

229

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.1

0.64

1.1

70.2

38.5

Major BPS

41.1

-0.5

1.2

40.3

Major PPT

74.5

0.55

0.7

68.5

Minor 5ss

35.2

-1.7

2.9

39.8

Minor BPS

-0.9

3.6

62.32

47.2

Associated Gene:

Gene:

SOX9

Ensembl Gene ID:

ENSAPLG00000013168

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013709

11080783 - 11084541

3759