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Intron Name: Anas_platyrhynchos_platyrhynchos_19_11090702_11092161_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11090702 - 11092161

Intron Length:

1460

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGATGCTT

5'SS Class:

major

3'SS Sequence:

GCCGTATTATTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTAAAA

U12 Branch Point Sequence:

GAAGCTTTAAAA

Flanking Amino Acid:

DVGFDFLVLPAV*

Intron Amino Acid Position:

117

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.3

0.62

71.4

39.9

Major BPS

73.1

0.58

79.6

29.1

Major PPT

61.2

0.25

59.1

40.9

Minor 5ss

31.3

-2.1

3.5

47.3

48.1

Minor BPS

55.3

0.16

1.5

59.6

39.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023487

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042749

11090694 - 11093244

2551