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Intron Name: Anas_platyrhynchos_platyrhynchos_19_11313808_11313956_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11313808 - 11313956

Intron Length:

149

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGTGCT

5'SS Class:

strong_major

3'SS Sequence:

CCTTATTTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCCTTAT

U12 Branch Point Sequence:

CCCCCCTTATTT

Flanking Amino Acid:

LRQLFLDRLETLTKEGFESI

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.2

0.99

0.7

26.7

Major BPS

66.5

0.41

1.1

57.2

40.1

Major PPT

84.5

0.78

0.8

76.2

37.5

Minor 5ss

29.9

-2.3

3.2

41.3

45.2

Minor BPS

53.9

0.2

1.7

64.57

46.4

Associated Gene:

Gene:

COG1

Ensembl Gene ID:

ENSAPLG00000014310

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031685

11313377 - 11316975

3599

ENSAPLT00000014925

11313528 - 11318645

5118