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Intron Name: Anas_platyrhynchos_platyrhynchos_19_11314983_11315587_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11314983 - 11315587

Intron Length:

605

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGAAGA

5'SS Class:

strong_major

3'SS Sequence:

TTCTGTTACGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CAATAAC

U12 Branch Point Sequence:

TGCCCAATAACG

Flanking Amino Acid:

VTSKIRLPMQPSWYVQSLLF

Intron Amino Acid Position:

346

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.3

0.78

0.9

73.4

37.3

Major BPS

57.8

0.19

1.1

59.6

32.6

Major PPT

76.9

0.61

0.9

72.9

36.4

Minor 5ss

38.9

-1.2

2.8

49.3

46.5

Minor BPS

47.8

-0.3

56.33

44.1

Associated Gene:

Gene:

COG1

Ensembl Gene ID:

ENSAPLG00000014310

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014925

11313528 - 11318645

5118

ENSAPLT00000031685

11313377 - 11316975

3599