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Intron Name: Anas_platyrhynchos_platyrhynchos_19_11315750_11316037_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11315750 - 11316037

Intron Length:

288

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACGCGAG

5'SS Class:

major

3'SS Sequence:

CTTCTTTTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCATCAA

U12 Branch Point Sequence:

GCCAGCGGAGCC

Flanking Amino Acid:

EKLMEEKQEKKAGAFPMTQN

Intron Amino Acid Position:

400

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.3

0.67

1.1

63.4

43.1

Major BPS

66.5

0.41

1.1

68.2

37.5

Major PPT

91.7

0.94

0.6

87.6

22.6

Minor 5ss

34.6

-1.8

3.5

49.3

Minor BPS

32.5

-1.3

2.2

36.24

40.6

Associated Gene:

Gene:

COG1

Ensembl Gene ID:

ENSAPLG00000014310

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031685

11313377 - 11316975

3599

ENSAPLT00000014925

11313528 - 11318645

5118