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Intron Name: Anas_platyrhynchos_platyrhynchos_19_11316166_11316286_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11316166 - 11316286

Intron Length:

121

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGCAGCAC

5'SS Class:

major

3'SS Sequence:

TCTCTGCTCGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTAAGAT

U12 Branch Point Sequence:

CTTTGCTAAGAT

Flanking Amino Acid:

AKASRSKHDSRVEKVTDFLE

Intron Amino Acid Position:

442

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

64.9

0.35

1.1

53.5

39.5

Major BPS

55.1

0.13

1.2

52.7

41.6

Major PPT

0.54

0.8

69.1

31.4

Minor 5ss

23.9

-3

3.3

42.8

Minor BPS

45.2

-0.2

2.3

68.73

47.8

Associated Gene:

Gene:

COG1

Ensembl Gene ID:

ENSAPLG00000014310

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031685

11313377 - 11316975

3599

ENSAPLT00000014925

11313528 - 11318645

5118