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Intron Name: Anas_platyrhynchos_platyrhynchos_19_11316396_11316861_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11316396 - 11316861

Intron Length:

466

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCT|GTAAGTGTG

5'SS Class:

major

3'SS Sequence:

TTGTGCCTTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTCAA

U12 Branch Point Sequence:

TGCCCCCAAATT

Flanking Amino Acid:

NLNRLVQRTSVLFGLLTGTE

Intron Amino Acid Position:

479

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.7

0.58

1.1

69.5

41.3

Major BPS

74.2

0.6

0.9

75.7

Major PPT

0.61

0.9

74.3

36.5

Minor 5ss

39.2

-1.2

3.4

59.1

45.3

Minor BPS

47.8

-0

66.83

43.9

Associated Gene:

Gene:

COG1

Ensembl Gene ID:

ENSAPLG00000014310

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031685

11313377 - 11316975

3599

ENSAPLT00000014925

11313528 - 11318645

5118