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Intron Name: Anas_platyrhynchos_platyrhynchos_19_11317153_11318504_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

11317153 - 11318504

Intron Length:

1352

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTGGTAAA

5'SS Class:

major

3'SS Sequence:

TTAAAACAAACAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TGGTTTTTAAAA

Flanking Amino Acid:

SATRNAERVQVPPPALTRAE

Intron Amino Acid Position:

541

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.6

0.6

1.2

75.3

36.2

Major BPS

90.4

0.7

90.2

19.3

Major PPT

55.8

0.13

1.1

49.1

42.7

Minor 5ss

-2.3

2.7

33.5

41.8

Minor BPS

64.3

0.44

1.4

68.67

37.7

Associated Gene:

Gene:

COG1

Ensembl Gene ID:

ENSAPLG00000014310

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014925

11313528 - 11318645

5118