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Intron Name: Anas_platyrhynchos_platyrhynchos_19_11319885_11321518_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11319885 - 11321518

Intron Length:

1634

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTGGGTTTC

5'SS Class:

major

3'SS Sequence:

CTCTTTGTCTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTAAT

U12 Branch Point Sequence:

TTGCTGTTAATG

Flanking Amino Acid:

RLKGNKVSCASSSSDSGSSS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.3

0.57

69.6

37.9

Major BPS

84.4

0.85

34.5

Major PPT

80.9

0.69

0.8

79.5

32.5

Minor 5ss

38.4

-1.3

3.2

52.3

Minor BPS

49.9

-0.1

2.1

59.85

42.7

Associated Gene:

Gene:

FAM104B

Ensembl Gene ID:

ENSAPLG00000014303

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014900

11319639 - 11326653

7015