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Intron Name: Anas_platyrhynchos_platyrhynchos_19_11442378_11442756_R


Intron Information:

Intron Rank:
1

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
11442378 - 11442756

Intron Length:
379

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTAACCCTT

5'SS Class:
major

3'SS Sequence:
TTGCCCCATGCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
CAGTCAC

U12 Branch Point Sequence:
TTTGCCCCATGC

Flanking Amino Acid:
SGESSRLLPQAARLVELPYP

Intron Amino Acid Position:
87

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
76.9
0.63
1.2
72.7
44.5

Major BPS
54.8
0.12
1.2
58.7
38.1

Major PPT
72.6
0.51
0.9
66.6
34.5

Minor 5ss
49.3
-0
2.9
74
42.4

Minor BPS
41.5
-0.6
2.3
59.12
45.7

Associated Gene:

Gene:
TSPAN10

Ensembl Gene ID:

Chromosome:
19

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

11441268 - 11443775
2508