Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_19_11537930_11538957_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11537930 - 11538957

Intron Length:

1028

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAATCGA

5'SS Class:

strong_major

3'SS Sequence:

GCTCCCTTTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTCGAG

U12 Branch Point Sequence:

CGTGCTTCAGTT

Flanking Amino Acid:

NFFARLLGFQVSGSFRIVLL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.1

0.8

0.9

71.3

40.5

Major BPS

49.9

-0

1.7

58.2

48.3

Major PPT

78.4

0.64

0.8

68.8

37.1

Minor 5ss

32.9

-1.9

2.9

41.7

44.7

Minor BPS

45.8

-0.2

1.8

60.3

Associated Gene:

Gene:

SLC38A10

Ensembl Gene ID:

ENSAPLG00000005199

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033781

11536690 - 11567352

30663

ENSAPLT00000005372

11536690 - 11567352

30663