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Intron Name: Anas_platyrhynchos_platyrhynchos_19_11562861_11564739_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11562861 - 11564739

Intron Length:

1879

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTGAGTGCT

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTCTTCTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCCTTAT

U12 Branch Point Sequence:

TTTTCCTTATTT

Flanking Amino Acid:

QPENAESKLEDAGQAKLLDH

Intron Amino Acid Position:

586

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.6

0.77

0.9

74.9

35.3

Major BPS

78.8

0.72

67.9

40.1

Major PPT

88.2

0.86

0.6

81.7

30.3

Minor 5ss

29.4

-2.4

3.1

33.3

41.7

Minor BPS

81.5

1.07

1.4

95.91

30.5

Associated Gene:

Gene:

SLC38A10

Ensembl Gene ID:

ENSAPLG00000005199

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005372

11536690 - 11567352

30663

ENSAPLT00000033781

11536690 - 11567352

30663

ENSAPLT00000028652

11536631 - 11567352

30722