Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_19_11578049_11578443_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

11578049 - 11578443

Intron Length:

395

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACGGCTC

5'SS Class:

major

3'SS Sequence:

CCCCGTGCTGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CACGCAT

U12 Branch Point Sequence:

TTTCTCCTCTCT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.8

0.7

43.2

Major BPS

49.9

-0

1.3

37.5

Major PPT

67.6

0.4

0.9

60.2

35.4

Minor 5ss

34.2

-1.8

3.6

50.1

46.4

Minor BPS

38.1

-0.8

3.6

73.67

43.1

Associated Gene:

Gene:

CEP131

Ensembl Gene ID:

ENSAPLG00000012961

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019347

11577663 - 11588558

10896

ENSAPLT00000013508

11577663 - 11588558

10896