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Intron Name: Anas_platyrhynchos_platyrhynchos_19_11578559_11578747_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

5UTR

Intron Coordinates:

11578559 - 11578747

Intron Length:

189

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGAGGGCA

5'SS Class:

major

3'SS Sequence:

CGGCCCCACGCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GGCTGAG

U12 Branch Point Sequence:

GCTGGCTGAGCC

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.1

0.64

64.5

Major BPS

43.9

-0.3

1.6

36.8

44.4

Major PPT

57.9

0.18

0.9

50.5

Minor 5ss

24.2

-3

3.2

26.5

Minor BPS

42.8

-0.5

2.1

51.68

45.2

Associated Gene:

Gene:

CEP131

Ensembl Gene ID:

ENSAPLG00000012961

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019347

11577663 - 11588558

10896

ENSAPLT00000013508

11577663 - 11588558

10896