Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_19_11580266_11580985_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11580266 - 11580985

Intron Length:

720

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGGACA

5'SS Class:

strong_major

3'SS Sequence:

CTCCCTCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCTGCAG

U12 Branch Point Sequence:

GGCTCCTGGAGC

Flanking Amino Acid:

ARLARRAAIQELHQKRAQKA

Intron Amino Acid Position:

139

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.9

0.73

72.3

Major BPS

38.5

-0.7

1.7

47.8

Major PPT

74.4

0.55

0.7

68.7

Minor 5ss

31.2

-2.2

3.3

40.2

45.7

Minor BPS

48.3

-0.1

1.8

56.08

42.3

Associated Gene:

Gene:

CEP131

Ensembl Gene ID:

ENSAPLG00000012961

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019347

11577663 - 11588558

10896

ENSAPLT00000013508

11577663 - 11588558

10896