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Intron Name: Anas_platyrhynchos_platyrhynchos_19_11606304_11606592_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

11606304 - 11606592

Intron Length:

289

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGTGCC

5'SS Class:

strong_major

3'SS Sequence:

CCCTTGCCCCGAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TGAGGAT

U12 Branch Point Sequence:

TGGAGCGGGACG

Flanking Amino Acid:

KEIGHGWFGKVFLGEVNSGI

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.8

0.96

0.8

78.4

29.1

Major BPS

47.8

-0.1

1.5

45.5

47.5

Major PPT

49.2

-0

1.6

53.2

36.7

Minor 5ss

28.5

-2.5

35.5

41.2

Minor BPS

36.2

-1.2

2.3

40.53

43.6

Associated Gene:

Gene:

AATK

Ensembl Gene ID:

ENSAPLG00000030122

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030846

11602027 - 11613685

11659

ENSAPLT00000023939

11604797 - 11613475

8679

ENSAPLT00000033346

11595026 - 11613685

18660