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Intron Name: Anas_platyrhynchos_platyrhynchos_19_11613279_11613456_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11613279 - 11613456

Intron Length:

178

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGGTCC

5'SS Class:

strong_major

3'SS Sequence:

TGCTCCTTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCTCAT

U12 Branch Point Sequence:

TCATGCCGAATC

Flanking Amino Acid:

VSDSDMDSIGGSSEDGDRE*

Intron Amino Acid Position:

1644

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.2

0.83

0.9

72.6

Major BPS

79.7

0.74

79.6

35.6

Major PPT

81.5

0.71

0.8

72.8

37.4

Minor 5ss

32.6

-2

3.2

41.8

45.1

Minor BPS

44.8

-0.4

2.1

56.72

41.9

Associated Gene:

Gene:

AATK

Ensembl Gene ID:

ENSAPLG00000030122

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033346

11595026 - 11613685

18660

ENSAPLT00000030846

11602027 - 11613685

11659