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Intron Name: Anas_platyrhynchos_platyrhynchos_19_11617440_11623338_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

11617440 - 11623338

Intron Length:

5899

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGCCCT

5'SS Class:

strong_major

3'SS Sequence:

TGCACGGGGAGAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CCTGCAC

U12 Branch Point Sequence:

CTTCCCTGCACG

Flanking Amino Acid:

YSVAVPAFSQPLLNSALLSP

Intron Amino Acid Position:

447

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.3

0.81

0.9

71.4

40.3

Major BPS

46.1

-0.2

1.4

54.6

40.8

Major PPT

40.4

-0.5

1.7

33.3

40.6

Minor 5ss

35.1

-1.7

3.1

48.4

47.3

Minor BPS

49.9

-0.1

61.75

45.7

Associated Gene:

Gene:

BAIAP2

Ensembl Gene ID:

ENSAPLG00000012542

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013079

11617335 - 11654619

37285