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Intron Name: Anas_platyrhynchos_platyrhynchos_19_11623502_11623816_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11623502 - 11623816

Intron Length:

315

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGGAGCA

5'SS Class:

strong_major

3'SS Sequence:

TGCTCCCCTTCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTGAT

U12 Branch Point Sequence:

TGCTGCTGATGG

Flanking Amino Acid:

DNDGSERVHTSLQQGKSSST

Intron Amino Acid Position:

392

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.7

0.72

68.7

36.4

Major BPS

76.2

0.65

1.1

65.3

43.7

Major PPT

77.7

0.62

0.8

73.9

31.2

Minor 5ss

29.3

-2.4

3.5

46.3

Minor BPS

39.7

-0.9

2.2

44.48

47.2

Associated Gene:

Gene:

BAIAP2

Ensembl Gene ID:

ENSAPLG00000012542

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030280

11623075 - 11654491

31417

ENSAPLT00000013079

11617335 - 11654619

37285