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Intron Name: Anas_platyrhynchos_platyrhynchos_19_11624204_11624823_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11624204 - 11624823

Intron Length:

620

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGCTC

5'SS Class:

strong_major

3'SS Sequence:

TGTCTCCTGCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGGTGAA

U12 Branch Point Sequence:

TGGTCCTTGTCT

Flanking Amino Acid:

NVQPKNSYASAENKTLPRSS

Intron Amino Acid Position:

302

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.2

0.83

0.9

38.2

Major BPS

45.7

-0.2

1.4

34.8

43.8

Major PPT

72.8

0.51

65.9

40.9

Minor 5ss

29.9

-2.3

3.4

45.6

Minor BPS

48.5

-0

3.5

79.87

42.4

Associated Gene:

Gene:

BAIAP2

Ensembl Gene ID:

ENSAPLG00000012542

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030280

11623075 - 11654491

31417

ENSAPLT00000013079

11617335 - 11654619

37285