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Intron Name: Anas_platyrhynchos_platyrhynchos_19_11648113_11649964_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

11648113 - 11649964

Intron Length:

1852

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGT|GTGGGGCTG

5'SS Class:

weak_major

3'SS Sequence:

AAAACTACAGCAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

AAGTAAA

U12 Branch Point Sequence:

AAAGCATCAATA

Flanking Amino Acid:

SSVLVGRRSWVSSLKGDENP

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

52.7

0.06

1.2

44.3

44.9

Major BPS

58.6

0.22

1.1

59.7

34.6

Major PPT

53.3

0.08

1.1

46.1

40.1

Minor 5ss

29.5

-2.3

3.6

38.2

46.8

Minor BPS

46.1

-0.3

1.8

53.72

38.2

Associated Gene:

Gene:

BAIAP2

Ensembl Gene ID:

ENSAPLG00000012542

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030280

11623075 - 11654491

31417

ENSAPLT00000013079

11617335 - 11654619

37285