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Intron Name: Anas_platyrhynchos_platyrhynchos_19_11681351_11684194_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11681351 - 11684194

Intron Length:

2844

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAAGAG

5'SS Class:

strong_major

3'SS Sequence:

CCTGTGTTGGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTGAA

U12 Branch Point Sequence:

ACAGCCTGACCT

Flanking Amino Acid:

KHPEGNIMSVSVNGDVRFFD

Intron Amino Acid Position:

1138

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.5

0.72

68.4

36.7

Major BPS

72.1

0.55

1.2

63.4

44.3

Major PPT

68.8

0.42

1.1

64.3

41.5

Minor 5ss

29.1

-2.4

3.4

37.5

47.2

Minor BPS

48.4

-0

1.9

63.93

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011777

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012356

11676462 - 11784807

108346

ENSAPLT00000038032

11676462 - 11784807

108346

ENSAPLT00000034967

11676462 - 11784807

108346